PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC03G24690.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family CPP
Protein Properties Length: 699aa    MW: 77426.8 Da    PI: 6.4987
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC03G24690.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR48.41.9e-15397435341
              TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 
                       k+C+Ckks+Clk+YCeCfa++++Cse+C+C +C+N+ +
  OPUNC03G24690.1 397 GKRCSCKKSECLKLYCECFASKVYCSESCSCRGCFNDYS 435
                      589*********************************876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011146.4E-15395436IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163417.969396489IPR005172CRC domain
PfamPF036389.7E-12398433IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 699 aa     Download sequence    Send to blast
MIKSSDLVHI PSIFTSPEVN SQKGSKTSIC IDRSLSQAYH DSPENASVLP NNLPRRVQLS  60
SDTLGRDKRH DITGKADHET AQKHVKLSCF DQSGLDKMEQ LTSGMNVQKR DLAKTHNDEI  120
TACDWDYLDT QYDSCVVPES DPRLEIAELE TPKNGDVMPG KSFLPIAEAN LENSRRKLFL  180
GSADCYFQSA VDIINVYCTS RGKDVATNYV SGILPCPKES QLIPDHHFSD TLEVPSDYMA  240
MNHSDVSQHQ RGLHRRGLFN DKVRDPTMGV KSVSNLGAST CATRHRSIPD DNYSKLVGSP  300
VCALPNVDLH LVRMTEQMVP YNMSCTFNST VSISEHNTEI SNVVPDNQLA PNTSEMNTHN  360
QGDYSSQATM PTSAGNSGQE NPKRKRQKCQ NGDVDSGKRC SCKKSECLKL YCECFASKVY  420
CSESCSCRGC FNDYSHEETV LSTRNRIESR NPLAFAPKVI RTCGPGLEFG SGVGCSMSCR  480
CESCKNSFGI TRGMERLETK EIERADQKMK DHPKEEQSEM DKYHALCEIW GVQSTENLFT  540
TPSIDSRRAF ALFPSECPKS SLPSSTRTSS SQLHSPKITD LLLSPFGSYT QMLLGNEASD  600
MLLQQVDSSS NASFRIESPN RKKRVSPLRT GNTLSPTCSR ELALKSIIPS FPSLTGDANS  660
SLFLVDHLDQ LRPYGASIAD SILAEDSQTL TGTYFSYMF
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1205050.0AC120505.7 Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete sequence.
GenBankAP0149590.0AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015629591.10.0PREDICTED: protein tesmin/TSO1-like CXC 2
TrEMBLA0A0E0KGM50.0A0A0E0KGM5_ORYPU; Uncharacterized protein
STRINGLOC_Os03g43730.10.0(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP147741921
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14770.11e-36TESMIN/TSO1-like CXC 2